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IB2: Integrative Bioinformatics and Biostatistics
IB2: Integrative Bioinformatics and Biostatistics
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Martina Čarnogurská (Hrivňáková)

Martina Čarnogurská (Hrivňáková)

PhD student

Masaryk University

Interests
  • microbiome
Education
  • MSc in Biology, 2019

    Masaryk University, CZ.

  • Bc in Biology, 2015

    Masaryk University, CZ.

Latest

  • A quantitative tumor-wide analysis of morphological heterogeneity of colorectal adenocarcinoma
  • Pooled analysis of 3,741 stool metagenomes from 18 cohorts for cross-stage and strain-level reproducible microbial biomarkers of colorectal cancer
  • Search for Mutations Connected With Non-Response to Anti-EGFR Therapy in mCRC in the Morphologically Defined Regions of Primary Tumours
  • Multiple regulatory events contribute to a widespread circular RNA downregulation in precancer and early stage of colorectal cancer development
  • An invasion front gene expression signature for higher-risk patient selection in stage IIA MSS colon cancer
  • Molecular portraits of colorectal cancer morphological regions
  • Additional markers of response to anti-EGFR therapy in metastatic colon cancer: Morphological context matters
  • Identification of high risk patients in stage II pT3N0 microsatellite-stable colorectal cancer
  • Importance of tumor sampling in transcriptomics-based risk stratification
  • The impact of tumour morphology landscape on molecular signatures
  • Colorectal tumour mucosa microbiome is enriched in oral pathogens and defines three subtypes that correlate with markers of tumour progression
  • Consensus molecular subtypes of morphological regions on colorectal tumors

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