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Impact of intrapartum antibiotic prophylaxis on the oral and fecal bacteriomes of children in the first week of life
Intrapartum antibiotic prophylaxis (IAP) is commonly used during C-section delivery and in Group B Streptococcus-positive women before …
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Impact of intrapartum antibiotic prophylaxis on the oral and fecal bacteriomes of children in the first week of life
An invasion front gene expression signature for higher-risk patient selection in stage IIA MSS colon cancer
Stage II colon cancer (CC) encompasses a heterogeneous group of patients with diverse survival experiences: 87% to 58% 5-year relative …
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An invasion front gene expression signature for higher-risk patient selection in stage IIA MSS colon cancer
Molecular portraits of colorectal cancer morphological regions
Transcriptomics and tumor morphology are intertwined.
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Molecular portraits of colorectal cancer morphological regions
Enrichment of human nasopharyngeal bacteriome with bacteria from dust after short-term exposure to indoor environment: a pilot study
Background Indoor dust particles are an everyday source of human exposure to microorganisms and their inhalation may directly affect …
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Enrichment of human nasopharyngeal bacteriome with bacteria from dust after short-term exposure to indoor environment: a pilot study
IntOMICS: A Bayesian Framework for Reconstructing Regulatory Networks Using Multi-Omics Data
We provide the R implementation of IntOMICS
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IntOMICS: A Bayesian Framework for Reconstructing Regulatory Networks Using Multi-Omics Data
Using empirical biological knowledge to infer regulatory networks from multi-omics data
We provide IntOMICS, a framework for multi-omics data integration using a novel approach to biological knowledge discovery.
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Using empirical biological knowledge to infer regulatory networks from multi-omics data
Vegan Diet Is Associated With Favorable Effects on the Metabolic Performance of Intestinal Microbiota: A Cross-Sectional Multi-Omics Study
Background and Aim: Plant-based diets are associated with potential health benefits, but the contribution of gut microbiota remains to …
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Vegan Diet Is Associated With Favorable Effects on the Metabolic Performance of Intestinal Microbiota: A Cross-Sectional Multi-Omics Study
Colorectal tumour mucosa microbiome is enriched in oral pathogens and defines three subtypes that correlate with markers of tumour progression
Long-term dysbiosis of the gut microbiome has a significant impact on colorectal cancer (CRC) progression and explains part of the …
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Colorectal tumour mucosa microbiome is enriched in oral pathogens and defines three subtypes that correlate with markers of tumour progression
An explorative analysis of ABCG2/TOP-1 mRNA expression as a biomarker test for FOLFIRI treatment in stage III colon cancer patients: results from retrospective analyses of the PETACC-3 trial
Biomarker-guided treatment for patients with colon cancer is needed. We tested ABCG2 and topoisomerase 1 (TOP1) mRNA expression as …
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An explorative analysis of ABCG2/TOP-1 mRNA expression as a biomarker test for FOLFIRI treatment in stage III colon cancer patients: results from retrospective analyses of the PETACC-3 trial